{"id":3077,"date":"2021-05-10T08:25:33","date_gmt":"2021-05-10T08:25:33","guid":{"rendered":"https:\/\/er-c.org\/?page_id=3077"},"modified":"2021-05-10T21:48:18","modified_gmt":"2021-05-10T21:48:18","slug":"dr-probe-documentation-msa-input","status":"publish","type":"page","link":"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-input\/","title":{"rendered":"Dr. Probe Documentation MSA Input"},"content":{"rendered":"\n\n<div id=\"wp-block-themeisle-blocks-slider-0c9de452\" class=\"wp-block-themeisle-blocks-slider glide\" data-per-view=\"1\" data-gap=\"0\" data-peek=\"0\" data-autoplay=\"4000\" data-height=\"300px\" data-hide-arrows=\"false\"><div class=\"glide__track\" data-glide-el=\"track\"><div class=\"glide__slides\"><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_001.png\" alt=\"\" title=\"\" data-id=\"2358\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_002.png\" alt=\"\" title=\"\" data-id=\"2359\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_003.png\" alt=\"\" title=\"\" data-id=\"2360\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_004.png\" alt=\"\" title=\"\" data-id=\"2361\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_005.png\" alt=\"\" title=\"\" data-id=\"2362\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_006.png\" alt=\"\" title=\"\" data-id=\"2363\"\/><\/figure><\/div><div class=\"wp-block-themeisle-blocks-slider-item-wrapper glide__slide\" tabindex=\"0\"><figure><img decoding=\"async\" class=\"wp-block-themeisle-blocks-slider-item\" src=\"https:\/\/er-c.org\/wp-content\/uploads\/2021\/05\/drprobe-teas_007.png\" alt=\"\" title=\"\" data-id=\"2364\"\/><\/figure><\/div><\/div><div class=\"glide__bullets\" data-glide-el=\"controls[nav]\"><button class=\"glide__bullet\" data-glide-dir=\"=0\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=1\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=2\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=3\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=4\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=5\"><\/button><button class=\"glide__bullet\" data-glide-dir=\"=6\"><\/button><\/div><\/div><\/div>\n\n\n\n\n\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div\n\t\t\t\n\t\t\tclass=\"so-widget-sow-headline so-widget-sow-headline-default-feea9c97c678\"\n\t\t\t\n\t\t><div class=\"sow-headline-container \">\n\t\t\t\t\t\t\t<h1 class=\"sow-headline\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/\" >\n\t\t\t\t\t\t\t\tDr. Probe<\/a>\t\t\t\t\t\t<\/h1>\n\t\t\t\t\t\t\t\t\t\t\t<div class=\"decoration\">\n\t\t\t\t\t\t<div class=\"decoration-inside\"><\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t<h3 class=\"sow-sub-headline\">\n\t\t\t\t\t\tHR(S)TEM image simulation package\t\t\t\t\t\t<\/h3>\n\t\t\t\t\t\t<\/div>\n<\/div>\n\n\n\n<div class=\"wp-block-themeisle-blocks-advanced-columns has-1-columns has-desktop-equal-layout has-tablet-equal-layout has-mobile-equal-layout has-default-gap has-vertical-unset\" id=\"wp-block-themeisle-blocks-advanced-columns-27948cc6\"><div class=\"wp-block-themeisle-blocks-advanced-columns-overlay\"><\/div><div class=\"innerblocks-wrap\">\n<div class=\"wp-block-themeisle-blocks-advanced-column\" id=\"wp-block-themeisle-blocks-advanced-column-cf76d8a1\">\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:10%\"><\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:80%\">\n<div class=\"wp-block-buttons is-content-justification-center is-layout-flex wp-block-buttons-is-layout-flex\">\n<div class=\"wp-block-button is-style-fill\"><a class=\"wp-block-button__link has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-download\/\" style=\"background-color:#023d6b\">Download<\/a><\/div>\n\n\n\n<div class=\"wp-block-button is-style-fill\"><a class=\"wp-block-button__link has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-installation\/\" style=\"background-color:#023d6b\">Installation<\/a><\/div>\n\n\n\n<div class=\"wp-block-button is-style-fill\"><a class=\"wp-block-button__link has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-registration\/\" style=\"background-color:#023d6b\">Registration<\/a><\/div>\n\n\n\n<div class=\"wp-block-button is-style-outline is-style-outline--1\"><a class=\"wp-block-button__link has-white-background-color has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-documentation\/\">Documentation<\/a><\/div>\n\n\n\n<div class=\"wp-block-button is-style-fill\"><a class=\"wp-block-button__link has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-examples\/\" style=\"background-color:#023d6b\">Examples<\/a><\/div>\n\n\n\n<div class=\"wp-block-button is-style-fill\"><a class=\"wp-block-button__link has-background\" href=\"https:\/\/er-c.org\/index.php\/software\/open-source-in-house-solutions\/dr-probe\/dr-probe-development\/\" style=\"background-color:#023d6b\">Development<\/a><\/div>\n<\/div>\n\n\n\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n<div\n\t\t\t\n\t\t\tclass=\"so-widget-sow-features so-widget-sow-features-default-da11e84927f7\"\n\t\t\t\n\t\t><ul\n\tclass=\"sow-features-list\n\tsow-features-responsive\">\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"GUI\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-gui\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf35c;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-gui\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tGUI\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"CELSLC\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-celslc\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf394;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-celslc\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tCELSLC\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #eb5f73; \"\n\t\t\t\ttitle=\"MSA\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf394;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tMSA\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"WAVIMG\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-wavimg\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf394;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-wavimg\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tWAVIMG\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"BuildCell\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-buildcell\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf394;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-buildcell\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tBuildCell\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(16.667% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-round\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"CellMuncher\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-cellmuncher\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-ionicons\" data-sow-icon=\"&#xf394;\"\n\t\tstyle=\"font-size: 30px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-cellmuncher\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tCellMuncher\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t<\/ul>\n<\/div>\n\n\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n<\/div>\n<\/div>\n\n\n\n<hr>\n&nbsp;\n<p class=\"sub1\" style=\"text-align: center;\">The program MSA calculates the diffraction of fast electrons in an atomic structure with the multislice algorithm. The results can be complex-valued wave functions, STEM images, CBED patterns, or probe intensity distributions.<\/p>\n\n&nbsp;\n\n&nbsp;\n<hr>\n\n\n\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n<div\n\t\t\t\n\t\t\tclass=\"so-widget-sow-features so-widget-sow-features-default-ae469545c495\"\n\t\t\t\n\t\t><ul\n\tclass=\"sow-features-list\n\tsow-features-responsive\">\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(25% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-square\"\n\t\t\t\tstyle=\"color: #eb5f73; \"\n\t\t\t\ttitle=\"Input\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-input\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-genericons\" data-sow-icon=\"&#xf412;\"\n\t\tstyle=\"font-size: 20px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-input\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tInput\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(25% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-square\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"Output\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-output\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-genericons\" data-sow-icon=\"&#xf412;\"\n\t\tstyle=\"font-size: 20px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-output\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tOutput\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(25% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-square\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"Control Files\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-control-files\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-genericons\" data-sow-icon=\"&#xf412;\"\n\t\tstyle=\"font-size: 20px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-control-files\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tControl Files\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t\t\t<li\n\t\t\tclass=\"sow-features-feature sow-icon-container-position-top\"\n\t\t\tstyle=\"display: flex; flex-direction: column; width: calc(25% - 25px);\"\n\t\t>\n\t\t\t\n\t\t\t\t\t\t<a\t\t\t\tclass=\"sow-icon-container sow-container-square\"\n\t\t\t\tstyle=\"color: #023d6b; \"\n\t\t\t\ttitle=\"Options\"\n\t\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-options\/\"\n\t\t\t\t\t\t\t\t>\n\t\t\t\t<span class=\"sow-icon-genericons\" data-sow-icon=\"&#xf412;\"\n\t\tstyle=\"font-size: 20px; color: #FFFFFF\" \n\t\taria-hidden=\"true\"><\/span>\t\t\t<\/a>\n\n\t\t\t<div class=\"textwidget\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h6 class=\"sow-features-feature-title\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<a\n\t\t\t\t\t\t\t\thref=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-msa\/dr-probe-documentation-msa-options\/\"\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t>\n\t\t\t\t\t\t\tOptions\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t\t\t\t<\/h6>\n\t\t\t\t\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/li>\n\n\t<\/ul>\n<\/div>\n\n\n<div style=\"height:40px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns has-background is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\" style=\"background-color:#ebebeb\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:100%\">\n<p class=\"sub1\" style=\"text-align: justify;\">Required input data for calculating the multislice algorithm with MSA are phase gratings in form of files. Since phase gratings are usually calculated from the projected potential of reasonably thin sample slices, the respective files are also called &#8220;slice files.&#8221;<\/p>\n\n\u00a0\n<p class=\"sub1\" style=\"text-align: justify;\">Slice files can be created by using the program <strong><a href=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-celslc\/\">CELSLC<\/a><\/strong> or with the <strong><a href=\"https:\/\/er-c.org\/index.php\/software\/stem-stm-simulation\/dr-probe\/dr-probe-documentation\/dr-probe-documentation-gui\/\">Dr. Probe graphical user interface<\/a><\/strong>. The files contain information about the size and sampling of object transmission functions, including the primary electron energy, slice thickness, grid size, etc., which are used by MSA to calculate the scattering and free-space propagation between subsequent slices of the sample.<\/p>\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:10%\"><\/div>\n<\/div>\n<\/div>\n<\/div><\/div>\n\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":2,"featured_media":0,"parent":2568,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"templates\/builder-fullwidth-std.php","meta":{"_themeisle_gutenberg_block_has_review":false,"footnotes":""},"class_list":["post-3077","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/pages\/3077","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/comments?post=3077"}],"version-history":[{"count":7,"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/pages\/3077\/revisions"}],"predecessor-version":[{"id":3354,"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/pages\/3077\/revisions\/3354"}],"up":[{"embeddable":true,"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/pages\/2568"}],"wp:attachment":[{"href":"https:\/\/er-c.org\/index.php\/wp-json\/wp\/v2\/media?parent=3077"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}